blacklist.cuh File Reference

#include <cuda/buffer>
#include <cuda/std/algorithm>
#include <cuda/std/optional>
#include <cuda/stream>
#include <algorithm>
#include <bit>
#include <filesystem>
#include <fstream>
#include <functional>
#include <limits>
#include <optional>
#include <span>
#include <stdexcept>
#include <vector>
#include <cuddl/detail/dna.hpp>
#include <cuddl/detail/hash.cuh>
#include <cuddl/error.hpp>
#include <cuddl/fastx.hpp>

Go to the source code of this file.

Classes
struct	cuddl::detail::blacklist_view
	Exact membership within the candidate's destination bucket. More...
class	cuddl::kmer_blacklist
	Immutable canonical k-mers excluded from construction, independent of sketch size. More...
class	cuddl::device_blacklist
	Reusable, move-only device lookup. More...

Namespaces
namespace	cuddl
	Batch operations over contiguous device rows.
namespace	cuddl::detail