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| template<typename Config > |
| constexpr uint64_t | cusbf::detail::dense_packed_insert_word_tile_capacity () |
| | Maximum uint64_t words loaded for a dense-packed insert block tile.
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| template<typename Config > |
| constexpr uint64_t | cusbf::detail::dense_packed_query_word_tile_capacity () |
| | Maximum uint64_t words loaded for a dense-packed query block tile.
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| |
| template<typename Config , uint32_t k_stride> |
| __device__ __forceinline__ void | cusbf::detail::contains_kmers_from_symbol_tile (const uint8_t *sequence_tile, uint64_t block_start_kmer, uint64_t block_kmers, bool block_all_valid, const filter_block< Config > *shards, uint64_t num_shards, uint8_t *output) |
| | Shared query path after a block symbol tile has been prepared.
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| |
| template<typename Config , uint32_t warps_per_block> |
| __device__ __forceinline__ void | cusbf::detail::insert_kmers_from_symbol_tile (const uint8_t *sequence_tile, uint64_t block_start_kmer, uint64_t block_kmers, bool block_all_valid, filter_block< Config > *shards, uint64_t num_shards, cub::WarpReduce< uint64_t >::TempStorage reduce_storage[warps_per_block][4]) |
| | Shared insert path after a block symbol tile has been prepared.
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| |
| template<typename Config > |
| __global__ void | cusbf::detail::contains_sequence_kmers_kernel (const char *sequence, uint64_t num_kmers, const filter_block< Config > *shards, uint64_t num_shards, uint8_t *output) |
| | Query kernel: one byte per k-mer (1 = present, 0 = absent or invalid).
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| template<typename Config > |
| __global__ void | cusbf::detail::insert_sequence_kmers_kernel (const char *sequence, uint64_t num_kmers, filter_block< Config > *shards, uint64_t num_shards) |
| | Insert kernel: sectorized Bloom updates grouped by minimizer shard.
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| template<typename Config > |
| __global__ void | cusbf::detail::contains_dense_packed_kmers_kernel (const uint64_t *words, uint64_t num_kmers, const filter_block< Config > *shards, uint64_t num_shards, uint8_t *output) |
| | Query kernel for a dense packed symbol buffer (DensePackedKmerInput).
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| |
| template<typename Config > |
| __global__ void | cusbf::detail::insert_dense_packed_kmers_kernel (const uint64_t *words, uint64_t num_kmers, filter_block< Config > *shards, uint64_t num_shards) |
| | Insert kernel for a dense packed symbol buffer (DensePackedKmerInput).
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