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| template<typename Config > |
| __device__ __forceinline__ uint64_t | cusbf::detail::packed_kmer_minimizer_hash (uint64_t packed_kmer) |
| | Minimum minimizer hash over all m-mers in a packed k-mer.
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| |
| template<typename Config > |
| __device__ __forceinline__ uint64_t | cusbf::detail::packed_kmer_smer_hash (uint64_t packed_kmer, uint64_t start) |
| | Bloom hash for the s-mer at start within a packed k-mer.
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| template<typename Config > |
| __device__ __forceinline__ void | cusbf::detail::load_shard_words4 (const filter_block< Config > *shards, uint64_t shard_index, uint64_t *w) |
| | Loads four 64-bit shard words with 256-bit (sm_100+) or 128-bit vector loads.
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| template<typename Config , uint64_t K> |
| __device__ __forceinline__ uint64_t | cusbf::detail::pack_kmer_from_tile (const uint8_t *tile, uint64_t start) |
| | Packs K encoded symbols from a shared-memory tile starting at start.
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| |
| template<typename Config , uint64_t K> |
| __device__ __forceinline__ uint64_t | cusbf::detail::advance_packed_kmer (uint64_t packed, uint8_t new_base) |
| | Slides a packed k-mer window by one encoded base.
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| |
| template<typename Config > |
| __device__ __forceinline__ bool | cusbf::detail::kmer_is_valid (const uint8_t *tile, uint64_t start) |
| | True when no symbol in the k-mer window is the alphabet invalid sentinel.
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| |
| template<typename Config > |
| __device__ __forceinline__ bool | cusbf::detail::prepare_sequence_hash_tiles (const char *sequence, uint64_t block_start_kmer, uint64_t block_kmers, uint8_t *sequence_tile) |
| | Encodes a block's sequence slice into sequence_tile and reports global validity.
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| template<uint32_t k_stride, typename Config > |
| __device__ __forceinline__ uint32_t | cusbf::detail::build_stride_kmer_valid_mask (uint64_t thread_offset, uint64_t block_kmers, bool block_all_valid, const uint8_t *sequence_tile) |
| | Builds the per-thread validity bitmask for strided query kernels.
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