cuddl::a48::record_metadata Struct Reference

Metadata attached to one decoded A48 record. More...

#include <a48.hpp>

Public Attributes
int64_t	id {-1}
	First-observed sequence ID (#id); -1 when omitted.
int64_t	tax_id {-1}
	Taxonomy ID (#tid); -1 when unknown.
std::string	name
	Organism/record name (#name).
std::string	filename
	Source filename (#file).
int64_t	bases {-1}
	Number of bases (#bases); -1 when omitted.
int32_t	contigs {-1}
	Number of contigs (#contigs); -1 when omitted.
float	gc {-1.0f}
	GC fraction (#gc); negative when omitted.
std::string	origin
	Origin (#origin).
std::string	lineage
	Lineage (#lineage).
uint32_t	len {}
	Bucket count recorded by #len; 0 when omitted.
int32_t	offset {-1}
	Global NLZ offset (#offset); -1 when omitted (legacy absolute-encoded rows).

Detailed Description

Metadata attached to one decoded A48 record.

Definition at line 39 of file a48.hpp.

Member Data Documentation

bases

int64_t cuddl::a48::record_metadata::bases {-1}

Number of bases (#bases); -1 when omitted.

Definition at line 49 of file a48.hpp.

{-1};

contigs

int32_t cuddl::a48::record_metadata::contigs {-1}

Number of contigs (#contigs); -1 when omitted.

Definition at line 51 of file a48.hpp.

{-1};

filename

std::string cuddl::a48::record_metadata::filename

Source filename (#file).

Definition at line 47 of file a48.hpp.

gc

float cuddl::a48::record_metadata::gc {-1.0f}

GC fraction (#gc); negative when omitted.

Definition at line 53 of file a48.hpp.

{-1.0f};

id

int64_t cuddl::a48::record_metadata::id {-1}

First-observed sequence ID (#id); -1 when omitted.

Definition at line 41 of file a48.hpp.

{-1};

len

uint32_t cuddl::a48::record_metadata::len {}

Bucket count recorded by #len; 0 when omitted.

Definition at line 59 of file a48.hpp.

{};

lineage

std::string cuddl::a48::record_metadata::lineage

Lineage (#lineage).

Definition at line 57 of file a48.hpp.

name

std::string cuddl::a48::record_metadata::name

Organism/record name (#name).

Definition at line 45 of file a48.hpp.

offset

int32_t cuddl::a48::record_metadata::offset {-1}

Global NLZ offset (#offset); -1 when omitted (legacy absolute-encoded rows).

Definition at line 61 of file a48.hpp.

{-1};

origin

std::string cuddl::a48::record_metadata::origin

Origin (#origin).

Definition at line 55 of file a48.hpp.

tax_id

int64_t cuddl::a48::record_metadata::tax_id {-1}

Taxonomy ID (#tid); -1 when unknown.

Definition at line 43 of file a48.hpp.

{-1};

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The documentation for this struct was generated from the following file:

• a48.hpp